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Corona Virus- Sequence alignment-Phylogeny analysis

Hi there, Just an exercise(as the research is already been done), I wanted to do sequence alignment and phylogeny for the novel corona virus 2019. However, in NCBI we have so many sequences already deposited, on what basis should i select one? Is there a free online tool to perform phylogeny analysis on selected sequence. Thanks for helping me learn!

sequencing alignment assembly
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written by Bioinformatician_in_trouble • Bioinformatician_in_trouble

1 answer

Try out Bioinformatics.recipes: https://www.bioinformatics.recipes/5f2249b7/recipes/

This analysis is available in real time at: https://nextstrain.org/ncov

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written by GenoMax GenoMax

Thanks, just checked it, I will still need to choose an accession number for it. My question is how do i select one particular sequence of all?

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written by Bioinformatician_in_trouble • Bioinformatician_in_trouble

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