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No mapping results after loading my own blast xml file.

I did local blastx with -outfmt 14, generating xml files (which is recommended by blast2go). When I import the xml files into OmicsBox and run Blast2GO mapping, no mapping result is there...

I tried to import the fasta files into OmicsBox, run blast first and then Blast2GO mapping, it worked well. The problem only occurs when I do local blast and import my blast output for blast2go mapping. I prefer blasting locally instead of running it within OmicsBox since its a big transcriptome. Any ideas?

blast blast2go rna-seq omicsbox
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written by 2822462298 • 2822462298

Both OmicsBox and Blast2GO are commercial products, you should contact their customer support. But maybe you need -outfmt 5 instead of -outfmt 14?

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written by h.mon h.mon

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