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LexWords perl module for ProDeGe software

I am attempting to run our installation of ProDeGe (https://www.nature.com/articles/ismej2015100) but have run up against he following error:

Can't locate LexWords.pm in @INC (you may need to install the LexWords module)

I have searched for LexWords module in Anaconda (where my perl install is) as well as CPAN and on Google and I cannot locate this. Does anyone know anything about what LexWords is or how I may best install it so I can get ProDeGe to run?

perl prodege installation module lexwords
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written by kmyers2 • kmyers2

Might be a custom module that the authors developed for that tool. The link in the paper is not even available anymore: https://prodege.jgi-psf.org/

I suggest you try contacting the corresponding author. If this is not possible you are probably better off finding a tool that is still maintained and does not cause trouble right at the installation step.

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written by ATpoint ATpoint

Thanks. I was afraid of that.

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written by kmyers2 • kmyers2

1 answer

I think the module you are looking for is available in this repo: https://bitbucket.org/berkeleylab/jgi-prodege/src/master/lib/. .

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written by Arup Ghosh Arup Ghosh

Thank you very much! That's it!

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written by kmyers2 • kmyers2

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