This is a test version of Biostars. For the public version, visit https://www.biostars.org.
SCOP domain classification - numbers identificantion

Hi, where can I find corresponding names to SCOP domain classification abbreviations? SCOPCLA - SCOP domain classification. The abbreviations denote:

TP=protein type, CL=protein class, CF=fold, SF=superfamily, FA=family

What is for example TP=1, or FA=4003653?

scop protein

1 answer

Parseable SCOPe files are here, and you want the one that starts with dir.cla. That particular family number doesn't exist, so maybe you want the old SCOP files.

Log in to answer this question.