Compact visualisation of enrichment analysis · Biostar

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Compact visualisation of enrichment analysis

What would be the best way to graphically represent GO enrichment analysis? I have performed the GO enrichment for two set of genes using PANTHER. For publication I want to put a graphical visualisation instead of usual table. I have tried REVIGO treemap and BinGO network. Putting 6 treemaps in a paper doesn't seem to be a good idea nor does the dense network from BinGO. Is there any better way to graphically represent my results?

rna-seq gene ontology panther david revigo

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updated 6.5 years ago by grant.hovhannisyan

• written 6.5 years ago by Arindam Ghosh

1 answer

ClusterProfiler offers a variety of visualization types.

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written 6.5 years ago by grant.hovhannisyan

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