RMA Normalisation for microarray data
Hi!
I have a question regarding the RMA normalisation for microarray data I came across on GEO. The expression data is related to toxic compounds. There are 200 compounds but for my analysis I only want to use 10 compounds. So, in this case do I need to normalise all the samples corresponding to 200 compounds or only the group of samples corresponding to the 10 compounds I want to make use of? It is really confusing. Please help.
Riya
1 answer
Log in to answer this question.
More posts like this
-
Analyzing multiple microRNA sequencing GEO datasets at the same time
written by Alana •
-
Help with edgeR analysis
written by rb_99 •
-
How to RMA normalize microarray expression data only without the CEL files?
written by Microuser •
-
How to find number of patients (percentage of given population) having high expression of gene A in…
written by yuvanesh •
-
Multiplatform batch correction using combat
written by Devyani •
-
Group aware normalisation of genomics data
written by GouthamAtla
-
Integrating microarray datasets from multiple series/studies
written by lessismore
-
RNA-Seq data, batch effect source
written by lu.ne
-
eUtils and GEO database
written by russhh
-
Impact Of Microarray Gene Expression Normalization On Clustering
written by elb83 •
