differential expression of geodataset using limma (input files)
Hello
My question after I download Geo soft files how I prepare the file to be suitable as input for limma package? I have read the manual but I could not find what I want??
• 1,172 views
•
link
updated
by
Ram
•
written
by
firstorthopedicdoctor •
•
written
by
firstorthopedicdoctor •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
r script is not working in snakemake
written by firstorthopedicdoctor •
-
Illumina HumanHT-12 V4.0 expression beadchip
written by zelda •
-
How to do FPKM differential analysis?
written by zhaoliang0302 •
-
Differential gene Expression analysis
written by sujasubramanian
-
Clinical data from GEO
written by landscape95
-
Download SRA files for a specific Transcription factor (e.g GATA3) from GEO
written by elpavloss2 •
-
How to Normalize the Microarray Data Obtained from ncbi?
written by pankajnarula84 •
-
visualize tiling array file to IGB
written by catherine
-
Gene Expression File And Gene Regulatory Network
written by someone •
-
How To Find Sample Information From Srr Labels In Geo?
written by user
Like in your first question, please add details. What datatype is this (methylation, expression array, SNP), which dataset is it, and what is the problem. limma documentation is extensive and should cover like 99.9% of questions one might have. Please be more specific. Also, please use
Questionwhen posting, notForum.[[ Please read before posting a question ::: How To Ask A Good Question ]]