This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Annotation LINE1 structure

Hello,

where can I find the annotation of the structure of each LINE1 element? I know that in repeatmasker is possible to find all the classes of transposons and retrotransposons and respective coordinates. But what about the annotation of their structure for each one?

Like for example:

for a putative LINE1 of the L1HS class, I would like to know the 5UTR, ORF1, ORF2, 3UTR coordinate.

Best

line1 annotation

0 answers

No answers yet.

Log in to answer this question.