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Circos Karyotype file preparation

I want to map my assembly result on already available genome. I have fasta file and very confused about how to get such format from fasta file.

chr - NZ_APCD01000001.1 NZ_APCD01000001.1 0 336904 chr1

chr - NZ_APCD01000002.1 NZ_APCD01000002.1 0 218148 chr1

chr - NZ_APCD01000003.1 NZ_APCD01000003.1 0 210150 chr1

chr - NZ_APCD01000004.1 NZ_APCD01000004.1 0 184270 chr1

chr - NZ_APCD01000005.1 NZ_APCD01000005.1 0 166931 chr1

chr - NZ_APCD01000006.1 NZ_APCD01000006.1 0 150642 chr1

Do suggest if anything else I can do to make circos plot. Thanks

circos fasta genome chromosome karyotype

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