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Error in pypeliner

I unable to proceed

library(survival)
data<-read.table("KM_plot_input.txt",header=T,row.names=1)
x<-survfit(Surv(data[,2],data[,3])~data[,1])
survdiff(Surv(data[,2],data[,3])~data[,1])

This returns: raise PipelineException('pipeline failed') pypeliner.scheduler.PipelineException: pipeline failed

sequencing

I think you need to ask on stackoverflow (today I've learnt)

What does your R code have to do with a python program?

Do you run that R codes via command line (or RStudio) or is this wrapped into some kind of pipeline / workflow manager?

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