Assemble multiple contigs to single
Hi, I assembled pacbio reads using SMRTlink and got 15 contigs. When I blast them with each other, it seems they share 30-50% of the regions among each other. Now I do not know how to assemble them together to make a long contig.
How can I reduce the number of these contigs?
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Contigs to Chromosomal Level Assembly
written by hafiz.talhamalik
-
MGS analysis and CheckM for binning quality control
written by Jonathan Yoou •
-
How to obtain organelle genome
written by wes •
-
How to detect and remove bacterial sequences in assembled eukaryote genome
written by Seq225
-
Polishing genome with pacbio reads
written by star715 •
-
blast makedb database creation error
written by star715 •
-
how extract our desirable data from two table?
written by star
-
Using Bandage to finish ambiguous long-read assembly?
written by predeus
-
Trinity transcriptome quality assessment
written by cwbenson1993 •
-
Merging two split contigs
written by s.kyungyong64 •
