This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Deferentially Expressed Genes using Genes count data obtained from RNASeq

I have obtained Genes Count data after the analysis of RNASeq dataset , Now I want to analyze my dataset and extract DEGs(Differentially Expressed Genes) as my end goal is to perform clustering using WGCA once I have the DEGs from my dataset, Can somebody guide me how to proceed or guide me any link that I can follow accordingly. Also is it a good way to proceed like this I mean first finding DEGs and then do WGCNA?

Regards

rna-seq genescount degs
• 1,647 views • link
updated by Benn Benn • written by naseerkhan861 • naseerkhan861

1 answer

A good way to start is reading the manual of limma. Read about the RNA-seq methods and follow some of the case studies. Good luck.

• 0 views • link
written by Benn Benn

Thanks Benn for your reply, I am reading limma, Thank you very much indeed!

• 0 views • link
written by naseerkhan861 • naseerkhan861

Log in to answer this question.

More posts like this