what's ./sra-search ACGT
Hi what's the difference between
sra-search ACGT SRR000001 SRR000002
and
sra-search "CGTA||ACGT" -e -a NucStrstr SRR000002
command?
what's ACGT argument?
rna-seq
• 639 views
•
link
updated
by
zx8754
1.2K
• |
written
by
z.ghseminezhad92
0
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Difference between EVmutation and EVcoupling?
written by xqyjxau 5Hi, Seems both EVmutation (https://marks.hms.harvard.edu/evmutation/index.html) and EVcouplings (https://v2.evcouplings.org/) can provide the evolutionary coupling scores. What's the difference between these two? Some simple but understandable answers? …
-
I need to perform a sum with values from several outputs of a program
written by pavelasquezv 5Hi all, I need to perform a sum with values from several outputs of a program. The loop is the following and it's perfect: `cat …
-
What's the difference between bait coverage and target coverage of picard CollectHsMetrics?
written by Tao 4What's the difference between bait coverage and target coverage of picard CollectHsMetrics? What's the BAIT_INTERVALS and TARGET_INTERVALS mean?
-
Technical and Biological reads difference
written by Kausik 4Hello all Can someone help me in knowing the difference between the Technical reads and Biological reads in a .SRA file? While running fastq-dump or …
-
Difference SMRTlink / SMRTtools
written by pablo 35Hello, I have to do an analysis on PacBio data. I would like to know what's the difference between using the SMRTLink GUI or the …
-
Difference between samtools cat and the unix command cat?
written by yh362 5I am wondering, if I want to concatenate several .bam files, what's the difference between using samtools cat and the unix command cat?
-
difference between sra files - SRR n SRX
written by me.sr1510 0What's the difference between experiment SRA file (SRX file) and run SRA file (SRR files) apart from the point that an experiment contain a number …
-
About the differences of index-building process between Bowtie and BWA
written by ghostforever.shi 5Hi, everyone, I have a problem about the difference between Bowtie and BWA. It is said that BWA first built the suffix array and then …
-
Differences between co-expression and co-regulation
written by debitboro 27Hi biostars community, What's the difference between co-expression and co-regulation, is there any relationship between these two notions ?
-
What is the difference between different SRA reads from different lanes for one sample?
written by m.koohi.m 12I've searched the CCIS27304052ST-3-0 into SRA ncbi search box and the result are 4 different SRA for this sample. I wonder what is the difference …
sra-search -horsra-search -helpshould provide a clue.