what's ./sra-search ACGT
Hi what's the difference between
sra-search ACGT SRR000001 SRR000002
and
sra-search "CGTA||ACGT" -e -a NucStrstr SRR000002
command?
what's ACGT argument?
rna-seq
• 636 views
•
link
updated
by
zx8754
•
written
by
z.ghseminezhad92 •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
I need to perform a sum with values from several outputs of a program
written by pavelasquezv •Hi all, I need to perform a sum with values from several outputs of a program. The loop is the following and it's perfect: `cat …
-
What's the difference between bait coverage and target coverage of picard CollectHsMetrics?
written by Tao •What's the difference between bait coverage and target coverage of picard CollectHsMetrics? What's the BAIT_INTERVALS and TARGET_INTERVALS mean?
-
Technical and Biological reads difference
written by Kausik •Hello all Can someone help me in knowing the difference between the Technical reads and Biological reads in a .SRA file? While running fastq-dump or …
-
Difference SMRTlink / SMRTtools
written by pabloHello, I have to do an analysis on PacBio data. I would like to know what's the difference between using the SMRTLink GUI or the …
-
Difference between samtools cat and the unix command cat?
written by yh362 •I am wondering, if I want to concatenate several .bam files, what's the difference between using samtools cat and the unix command cat?
-
difference between sra files - SRR n SRX
written by me.sr1510 •What's the difference between experiment SRA file (SRX file) and run SRA file (SRR files) apart from the point that an experiment contain a number …
-
About the differences of index-building process between Bowtie and BWA
written by ghostforever.shi •Hi, everyone, I have a problem about the difference between Bowtie and BWA. It is said that BWA first built the suffix array and then …
-
Differences between co-expression and co-regulation
written by debitboroHi biostars community, What's the difference between co-expression and co-regulation, is there any relationship between these two notions ?
-
What is the difference between different SRA reads from different lanes for one sample?
written by m.koohi.mI've searched the CCIS27304052ST-3-0 into SRA ncbi search box and the result are 4 different SRA for this sample. I wonder what is the difference …
-
contigs and scaffolds in abyss
written by Damian KaoWhat is the difference between contigs and scaffolds in abyss? If contigs are put together (scaffolded?) from unitigs using PE reads, what's the difference between …
sra-search -horsra-search -helpshould provide a clue.