bcftools -trim-alt-alleles errors
Hi,
I am trying to trim alternate alleles in my vcf file. I keep getting the following error. This is the command I am using to trim my file. I am new to this so any help would be appreciated.
bcftools view --trim-alt-alleles veo.remicade.selvar.vcf > veo.remicade.selvarv3.vcf
[E::bcf_remove_allele_set] Unexpected number of values in FORMAT/PL at 1:109339414; expected Number=G=15, but found 28
Error: Could not trim alleles at 1:109339414
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Biostar
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shraimrawan •
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shraimrawan •
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