Hey everyone! I'm working with a set of assembled genomes retrieved from the Genbank (https://www.ncbi.nlm.nih.gov/datasets/genome/?taxon=287&annotated_only=true&refseq_annotation=true). I've easily downloaded the sequences but now I would like …

Hi, I have a fastQ file obtained with a metagenomic untargeted sequencing. I performed a taxonomic analysis of it with kraken2, and my output looks …

Hi every one, i have this errror when i try to submit a sample > Your table upload failed because multiple BioSamples cannot have > …

I was trying to download data following the link https://www.covid19dataportal.org/sequences?db=embl-covid19. Here is what I did. So, I was interested in all the possible genome sequences, …

Hi, I saw the following post that targets the Pseudomonas genome sequences. I would like to extract all Biosample IDs and their corresponding isolation sources …

I am trying to download records from NCBI's BioSample database using Entrez Direct. I'm having particular issues with getting the BioProject ID(s) associated with some, …

The query might seem silly to you but as a beginner, I need to learn and develop these new skills. Query: Suppose, I wish to …

Hi. I am trying to find out if there is an easier way to download genes and corresponding pdb files. I think I will have …

Let's say I would like to download from NCBI all genomes obtained for marine bacterial (or soil or gut associated). I figured that [e-utilities][1] could …

Hi, I am trying to download the accompanying metadata to a list of SRA runs. I would specifically like this type of data: https://www.ncbi.nlm.nih.gov/Traces/study/?acc=SRR5070677&go=go which …