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Labeling clusters in Seurat

I have 2 plots, a control and stimulated group of cells.

After clustering, the cluster labels are 0, 1, 2 for the control and stim group.

How can I know what cell types are in each cluster?

I have the known cell type names in the rows of my data matrix, so I want to which cluster do they belong in

DimPlot(stem.combined, reduction = "umap", split.by = "control_subset")

Thanks

seurat rna-seq r

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