Thanks that looks perfect! I'll give it a try :)
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GO slimming allows you to trace back a child GO term to a broader, parent term. Is there a package (preferably R) that allows you to choose which parent you want to trace back to? i.e. For a set of GO IDs, I want to find all the ones that fall under the umbrella of, for example, "transcription regulator activity".
It would be most preferable to find a standalone program, rather than website, to do this (but I'll take anything in the end).
Thanks!
Thanks that looks perfect! I'll give it a try :)
The Bioconductor GO.db package allows you to work with the Gene Ontology graph.
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