Hi,

I am trying to convert gff hints to genebank for augustus training using gff2gbSmallDNA.pl script. This script comes with augustus software.

when I run gff2gbSmallDNA.pl, it finishes without any error and doesn't give any output.

gff-file : I have list of intron coordinates gff

example :

contig100067 b2h intron 730 761 0 . . grp=TRINITY_DN11987_c1_g42_i1;pri=4;src=E contig100067 b2h intron 1773 1807 0 . . grp=TRINITY_DN11987_c1_g42_i1;pri=4;src=E

seq-file: list of contig in fasta

I don't know how to go about it. Any comment/suggestion is welcome.

Thank you,