Hi all. I am trying to calculate LD in order to select proxy SNPs from 1000genomes for a group of SNPs. I wonder what window I should select. Does anyone have idea?
I am trying to perform a post-GWAS functional analysis of disease from fine-mapped SNPs, and then calculate SNPs in LD with these fine-mapped SNPs. Since …
<p>Hi,</p> <p>I am trying to calculate the correlation between two sets of SNPs within chromosome for cattle parentage verification.</p> <p>I have a list of pre-selected …
<p>Hi everyone,</p> <p>I am using the raw 1000G genotypes 20101123 release version to calculate all the LD results for paired SNPs.</p> <p>Last time if I …