Transcription Factor Enrichment Analysis
Is there some some tools to detect enrichment of transcription factors from microarray/RNAseq data? I have data sets from mouse and c.elegans
• 1,760 views
•
link
written
by
shruthih •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
TFs and enrichment analysis for TRAP sequencing
written by Genesis •
-
transcription factor binding site
written by priyadhawan11234 •
-
GSEA with mouse RNAseq data
written by Alex Gibbs
-
RNA-seq cluster analysis in R
written by MarjoryMollusc •
-
Identify Transcription factor from a list of genes
written by Natasha •
-
Identifying TFs from a list of genes
written by snp87 •
-
Finding genes expression levels full data sets
written by elisheva
-
transcription factor /miRNA enrichment analysis
written by ramyabhargavi •
-
Transcription Factor Identification Of Mirna Microarray Data
written by khan •
-
Transcription Factor Enrichment From Transcriptome
written by Dave Bridges
Brief Reminder On How To Ask A Good Question
You mean genes encoding for transcription factors enriched in your differentially-expressed genes? If not, please elaborate.
Yes - Tools to detect genes encoding for transcription factors from microarray/RNAseq data?
It's still not really clear what you want. Why can't you just do a standard differential expression analysis and pull out transcription factor genes from a list afterwards? Or are you trying to actually show that transcription factor genes are enriched in your differentially expressed gene set, as ATpoint said?