patients hg19 VEP Fasta and CACHE GRCh37
0
0
Entering edit mode
5.0 years ago
cocchi.e89 ▴ 260

Dear all, sorry in advance if it sounds silly but I want to be sure.

I am new to VEP, I have patients VCF files annotated with hg19 reference, shall I use VEP GRCh37 cache (homo_sapiens_vep_96_GRCh37.tar.gz) and fasta (Homo_sapiens.GRCh37.dna.toplevel.fa.gz), this is not an internal VEP "old version" that does not matter with my patients align right?

Thanks in advance for any suggestion!

vep ensembl grch37 hg19 • 1.6k views
ADD COMMENT

Login before adding your answer.

Traffic: 2660 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6