Hi, I made a protein aligment and then a phylogenetic tree which separated them in two groups. I was wondering if there is any program …

For those of you familiar with ggtree, how do I go about annotating numerical information per node and tip in ggtree? This gives me a …

Hi, I need to create a tree with tip labels coloured according to wildcards/expressions in the tip name. Ive been trying to do this with …

Hi there, I am creating a tree with ggtree and the only thing I am not able to do is to modify some tiplabs (only …

I want to annotate a phylogenetic tree with bootstrap and add color to certain clades in ggtree. Something goes wrong when I try to do …

I want to plot a tree and heatmap. the input is a distance matrix. I plot a tree using NJ. I used ggtree to plot …

hello, I would like to do a plot with ggtree, I have a phylogenetic tree, a vector with continuous values, and a matrix with binary …

Hi all, I have been using R to create and manipulate phylogenetic trees for a while, but I was wondering what the differences are between …

I'm trying to use R package ggtree to visualize my polygenic tree. I use the following codes: library(ggtree) library(treeio) tree_text<-read.table("tree.nwk") tree <-read.tree(text=as.character(tree_text$V1)) ggtree(tree, layout="daylight") + …

I'd like to plot a multiple gheatmap with a phylogenetic tree using ggtree and facet_plot. my data is like this: >head(resis) A B C 1 …