Uploading to SRA: multiple files per BioSample
Hi,
I am trying to upload some fairly deeply sequenced data to SRA. For each species, it is basically 2 lanes of Illumina 2500 per species. The data (as formatted by my colleague who did the sequencing) is split into about 40-50 files of 400-600 Mb each, per species. Each of these files is fastq.gz.
The SRA metadata/excel file only allows 4 files per library. Can I either just add columns to this (a ridiculous amount of columns!), or is there a way to merge the 400-600 Mb files into a few larger fastq.gz files of say a few Gb each?
Thanks!
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1 answer
You can just cat fastq.gz files together.
cat bacteria1*.fastq.gz > large_bacteria1.fastq.gz
for example.
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