Dear all,
I think I’ve collected most of the available posts
from Biostars about RNA-secondary structure prediction software:
(T-boxes, riboswitches and attenuators search).
Most of them are 5-6 years old, but some are recent.
I hope someone else has made a better collection,
simply I didn’t find it. Please, help me!
This one, A: How We Can Get The Secondary And Tertiary Structure For Interest Of Rna
is very nice, but 5.3 years old.
Search in NCBI, for example, gives more than 2000
articles, but it’s impossible to look through all of them.
Thank you!!
Natasha
RNA_secondary structure:
RNA secondary structure prediction
Secondary Structure Prediction software RNA/DNA
Finding Motif Representation Of A Given Secondary Structure Of Rna Sequence
How To Find Known Local Secondary Structures In Rna
pictures
Linear Or 2D Representation Of Protein Sequence Secondary Structure
RNA secondary structure - Feature extraction
hairpin, attenuators
A: CNA vs mRNA Expression level
search for attenuator in RNA secondary structure
A: Efficient way to check pdb enzyme protein models with certain mutations if the a
https://www.tbi.univie.ac.at/papers/Abstracts/martin_diss.pdf
1 answer
RNA_secondary structure - (2017) http://www.bioinf.uni-freiburg.de/Publications/Fallmann_Will_Engelhardt-Recen_advan_RNA-2017.pdf
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This is my question too. Is there a strategy for choosing RNA secondary structure prediction software? ...a lot of options https://en.wikipedia.org/wiki/List_of_RNA_structure_prediction_software
Sergey, thank you! I saw the article in WIKI, but I didn't
pay any attention to the references. They look useful.
Oh, there are more tools! The right panel is really useful!
Programs for RNA secondary structure predictions