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Genotype input in matrix eqtl with dosage dataset

I have performed eQTL with matrix eQTL tool before with hard call genotype. I wonder if anyone has tried with dosage genotype. The data format is 

SNP  A1  A2   F1 I1       F2 I2        F3 I3
     rs0001   A   C   0.98 0.02   1.00 0.00    0.00 0.01 
     rs0002   G   A   0.00 1.00   0.00 0.00    0.99 0.01

Can I just use this file as input? F1 I1 are usually using the same ID, so the file looks like

 SNP  A1  A2   ID01 ID01       ID02 ID02       ID03 ID03
     rs0001   A   C   0.98 0.02   1.00 0.00    0.00 0.01 
     rs0002   G   A   0.00 1.00   0.00 0.00    0.99 0.01

Can matrix eQTL identify the matching individual? or I need a different genoytpe format, if so, what kind? Thank you!

dosage genotype eqtl
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updated by devidjohn47 • devidjohn47 • written by Molly_K Molly_K

1 answer

For that I have some different tricks, if you interested with it then you just download a software bt this you will do it easily. For further about it epson error code 0x97 just visit with it.

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written by devidjohn47 • devidjohn47

This is highly inappropriate. Thanks but no thank.

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written by Molly_K Molly_K

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