Question: Coloring nodes by tip label attribute in figtree
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I have a phylogenetic tree composed of 1,000 or so sequences and am wanting to color each node based on a tip label attribute. I understand that Figtree allows users to input an annotation file to facilitate this process, but I am unable to locate the documentation to accomplish this.

For example, if I have a tip label of the form: MG280328/Common_Goldeneye/Anatidae/Anseriformes/USA/2016/H1N3/NAM, how can I structure the annotation file in order to color the node by bird order (e.g., Anseriformes)? Thanks for your input.

ADD COMMENTlink 14 months ago StarCute • 110 • updated 14 months ago karthic • 100
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Hi,

Why dont you try itol [https://itol.embl.de/], it is easy and you can choose whatever color you want,

KK

ADD COMMENTlink 14 months ago karthic • 100

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