Traitar installation issue
I am trying to install the Traitar (microbial trait analyzer) software on Biolinux8 running on a virtual box. When I install Traitar with pip I get the following error;
ImportError: Tornado requires an up-to-date SSL module. This means Python 2.7.9+ or 3.4+ (although some distributions have backported the necessary changes to older
Has anyone has had this issue and found a solution?
• 2,329 views
•
link
written
by
112498262 •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
What version of python are you running? What is the output of
python -Vorpython3 -V?Python version 2.7.6
Then upgrade your python to v.2.7.9+ as suggested above.
Thnaks, I have tried that. When I type python3 -V I get Python 3.4.3, so I'm not sure which one is running.
Depends what the
traitorinstaller is using. If you are getting that error then it is likely using plainpythonwhich would refer topython v.2. Which python doestraitarrecommend?In their published paper it says it is implemented in Python 2.7
Then I suggest that you look into upgrading your python 2 to the latest version.
Yes, but a submodule requires 2.7.9+ or 3.4+. Just upgrade.
I don't know why you picked this one, but you may want to use a more recent operating system.
That's all I have to work with unfortunately.
Try:
You may also need to upgrade pip first:
It will usually emit a warning if there's a newer version anyway.
Alternatively, download the latest
condainstaller, and useconda's python binary from hereon.https://conda.io/docs/download.html