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genome wide association study

Hii,, actually I got a data of brain cancer and normal genome of brain. So can anyone clear me how to compare these two genome for finding SNP?

genome
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updated by Bastien Hervé Bastien Hervé • written by sanamo5 • sanamo5

Hello sanamo5!

We believe that this post does not fit the main topic of this site.

Please use google and the search function on variant calling, and spend quality time on reading about variants and GWAS.

For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with.

If you disagree please tell us why in a reply below, we'll be happy to talk about it.

Cheers!

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written by ATpoint ATpoint

1 answer

Hello, please note that you already opened 3 threads in one day on this subject. Maybe that would have be better to write down in one thread what you want to achieve.

Google your key words (brain, SNP, discovery, tumor) could be a good start.

You also have a section for SNP in Biostars at the top of the page.

Or this thread on the topic : Best tool for variant calling

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written by Bastien Hervé Bastien Hervé

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