I have genomecov output as
chr1 0 145821816 195123441 0.747331
chr1 1 28676143 195123441 0.146964
chr1 2 6883876 195123441 0.0352796
chr1 3 3340282 195123441 0.0171188
chr1 4 2296338 195123441 0.0117686
chr1 5 1775261 195123441 0.00909814
chr1 6 1423228 195123441 0.00729399
I would like to plot the output as a histogram preferably in gnuplot. How can I do that? Thanks a lot,
1 answer
if that data is in a file you could do
plot'FILE' u (($3+$4)/2.):5:(($4-$3/2.)) w boxes
the location of the box is (($3+$4)/2.)
the width of the box is ($4-$3)/2
the height of the box is from the 5th column of your file.
if you have large files this will be slow.
cheers
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