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In blasp their is %identity? how to find similarity percentage in blastP ??

In blasp their is %identity? how to find similarity percentage in blastP ??

sequencing
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updated by Ram Ram • written by gangadharivinaykumar • gangadharivinaykumar

Hello gangadharivinaykumar,

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written by Sej Modha Sej Modha

This would be in the ppos (percentage positive matches) field (raw number of positive scoring matches, i.e. "protein similarity" is in positives.)

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written by cschu181 cschu181

That would be pident.

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written by cschu181 cschu181

1 answer

I didn't find ppos directly in the report. I click the sequence alignments that I am interested in, and click "alignment" column, and find the positivities, as well as identities.

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written by ganchen0430 • ganchen0430

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