Entering edit mode
5.7 years ago
Jeremy Leipzig
22k
I'm interested in finding all recent (>=2017/01/01) papers with at least 5 citations and open associated SRA data in Entrez. Can someone provide an automated strategy for this?
A search along the lines of (not satisfying 5+ citations criteria)
brings info about
This python script can automate the process but it'll throw an error when
get_sra_ids(pmid)
encounters an article with no linked SRA ids because of missing[u'LinkSetDb'][0][u'Link']
tag on those entries. The same may happen withget_citations(pmid)
.