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How to find out the descriptions of genes (functions) from D. melanogaster genome

Dear community!

I have a large list of transcripts upstream/downstream of target SNPs from D. melanogaster genome obtained by using MySQL - UCSC platform. I am wondering how I can obtain the definition o descriptions (functions) of these transcripts/genes of a way automatic?

Any suggestion is welcome!

Best regards, Antira

gene
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updated by Jean-Karim Heriche Jean-Karim Heriche • written by arenjigo • arenjigo

2 answers

You can get Gene Ontology annotations of fruitfly genes from Ensembl either using the perl API or BioMart or using FlyMine.

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written by Jean-Karim Heriche Jean-Karim Heriche

http://flybase.org/batchdownload

• 1 views • link
written by h.mon h.mon

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