This is a test version of Biostars. For the public version, visit https://www.biostars.org.
PSMC with option -d

Hi!

I want to get the local TMRCA for each locus from PSMC, so I use -d option.

Could anyone tell me, which column is the local TMRCA from output file DC line?

Thank you so much!

psmc software error

Please, expand the abbreviations.

TMRCA = Time of most recent common ancestor. PSMC = pairwise sequentially Markovian coalescent, a software developed by Heng Li

DC is a line name in the PSMC output file.

0 answers

No answers yet.

Log in to answer this question.