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Tutorial: raw count data- normalization

I got raw count data,which would consist of 32 samples and 20000 genes.

With this data, I have to normalize this.

first step; normalized gene expression values per sample.

second step: gene-wise normalization

Question 1: What is gene-wise normalization?

Question 2: how can I do this two step?

Question 3: In the first step, do I have to TMM normalization?

I'm a beginner, but no one can help me in my workplace. Please help me.

rna-seq gene

Hello ghmdsr!

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