This is a test version of Biostars. For the public version, visit https://www.biostars.org.
about the alignement
A T C

A 1 0 0 0
C 0 1 0 0
G 0 0 1 0
T 0 0 0 1
Why did we assign the value of 1 in the identity box and zero otherwise?

alignment sequence gene
• 923 views • link
updated by lakhujanivijay lakhujanivijay • written by minet950 • minet950

Please check the matrix you posted, this doesn't seem to be correct.

You can do add markup by selecting the text and clicking the 101010 button. When you compose or edit a post that button is in your toolbar, see image below:

101010 Button

In addition, please select a more meaningful title for your thread.

• 1 views • link
written by WouterDeCoster WouterDeCoster

1 answer

This appears to me as the most trivial nucleotide identity matrix, however, please format it correctly. Generally, 1 being match and 0 being mismatch. In a diagonally symmetric matrix like this , the order of the nucleotide in the rows and columns should be same.

• 1 views • link
written by lakhujanivijay lakhujanivijay

Log in to answer this question.

More posts like this