GC count calculation of thousnds genes in several region
Hi I have a list of more than 1000 genes, i want to calculate GC count of these genes in several region, like in exone, intron, 3utr, 5utr, upstream, downstream. and comparison them about different in gc count. Any one know how i can do this calculation in simple and fastest way!
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How To Calculate A Region‘ Gc Content In Reference Genome？？
Also one from Aaron Quinlan, BEDTools developer: Calculating Gc Content For All Ccds
geecee from EMBOSS also perfectly works for this purpose.
Thanks, Sishuo Wang, would you please paste the link of this tool here?
EMBOSS geecee.