Needleman Wunsch algorithm coding in python for global alignment
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6.0 years ago
hbleed121 ▴ 10

Hello everyone!

I was writing a code for needleman wunsch algorithm for Global alignment of pairs in python but I am facing some trouble to complete it. I really need some help in here for coding. I am a newbie to writing codes for bioinformatics algorithm so I am kinda lost. Can anyone go over through me code and add in suggestions to modify it? I would be really thankful and you can use the code too once it's done.

I am attaching the google docs link as I am not able to place the code in code box... https://docs.google.com/document/d/1SJ0PgyzpgQd9tadXMng5-GAoU7_aySL3keaORkLYRKQ/edit?usp=sharing ..

python global alignment algorithm needleman wunsch • 7.6k views
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Hello hbleed121,

what kind of trouble are your facing? Please be more specific. Or is it just a general coding question about how you can make your code faster, shorter, more beautiful, .... ?

fin swimmer

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