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bowtie 2 - source code requirement

here is the part of the bowtie wrapper script , i need to get accession for the source code of following files which are made bold in the below script. I am trying to modify the script for my needs but i am unable to get source code.

($vol,$script_path,$prog) 
                = File::Spec->splitpath($prog);
my $os_is_nix   = $^O ne "MSWin32";
my $align_bin_s = $os_is_nix ? **'bowtie2-align-s'** : 'bowtie2-align-s.exe'; 
my $build_bin   = $os_is_nix ? **'bowtie2-build'** : 'bowtie2-build.exe';               
my $align_bin_l = $os_is_nix ? **'bowtie2-align-l'** : 'bowtie2-align-l.exe'; 
my $align_prog_s= File::Spec->catpath($vol,$script_path,$align_bin_s);
my $align_prog_l= File::Spec->catpath($vol,$script_path,$align_bin_l);
my $align_prog  = $align_prog_s;
my $idx_ext_l     = 'bt2l'; 
my $idx_ext_s     = 'bt2'; 
my $idx_ext       = $idx_ext_s; 
my %signo       = ();
my @signame     = ();
alignment gene sequence sequencing

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What do you mean you are unable to get source code?

Yikes this is windows. If you are using Win 10 then I recommend that you install Linux subsystem for Windows 10. That can avoid all sorts of issues with compiling things for windows.

You can find the source code for bowtie2 here.

thank you , In linux version i'm getting all binary files, how can i get code for 'bowtie2-align-s'. ..?

and also i have source code but i want to identify the file which has code for the above mentioned file.

File that says *source.zip is the source code. That is source code for the entire package which will produce multiple executables.

sir i was unable to find the code in *sourcre.zip . I want code specifically for file 'bowtie2-align-s'.

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