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Calculate enrichment and abundance of miRNA from RNA-seq result

Hello, first time poster.

I am a biology student and a newbie in bioinformatics. I have the results from small RNA-seq to compare miRNA expression between treated and untreated group in the form of raw read count. I am wondering how I could calculate the enrichment and abundance of microRNA from those raw counts? Thank you

rna-seq

Hi, you are welcome. So, you have data in FASTQ format - is that correct?

Hello PDCD4!

Please comment if still of interest, closing for now.

If you disagree please tell us why in a reply below, we'll be happy to talk about it.

Cheers!

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