Err:510 in MISA tool
Dear all,
I am trying to identify microsatellites in my sample using MISA tool. I executed and got the results. But when I opened the .statistics file I got error 510. I searched in google but couldnt get that.
Specifications
Err:510
Sequence source file: "SO_6823_RP.fasta"
Definement of microsatellites (unit size / minimum number of repeats):
(1/10) (2/6) (3/5) (4/5) (5/5) (6/5)
Maximal number of bases interrupting 2 SSRs in a compound microsatellite: 100
RESULTS OF MICROSATELLITE SEARCH
Err:510
Total number of sequences examined: 4554886
Total size of examined sequences (bp): 7490335571
Total number of identified SSRs: 1788202
Number of SSR containing sequences: 1141579
Number of sequences containing more than 1 SSR: 387133
Number of SSRs present in compound formation: 299506
why I am getting that err: 510?
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mail2steff
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This looks like some other process has written to the file. MISA is a perl script and there's no way I can see for it to produce this.
EDIT: Another possibility is that the program used to open the file has an issue reading it.
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Jean-Karim Heriche
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You don't provide enough information. What operating system do you use ? What command did you run ? Did you get any error message ?
OS: Ubundu Command : perl misa.pl file.fasta I did not get any error message. But in the output file, file.statistics I got this error 510
How did you open the file to look at its content ?