This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Association with snptest

Hi all,

I would like to impute a region of n SNPs in a locus of interest, in order to perform an association test with snptest. Is there a way to do it?

Many thanks, Ben

gwas snp

2 answers

Yes, there are ways to do it. You can impute your data using the Michigan server

Hi You can impute your data using the Michigan Imputation server, Sanger Imputation server, or using your own scripts to impute using software such as IMPUTE2.

Log in to answer this question.