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GRCh37/hg19 human genome sequences from NCBI

Hello all,

How can I download one single file containing all chromosomes sequences of GRCh37/hg19 for humans NCBI?

Thank you.

ncbi hg19
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updated by Jean-Karim Heriche Jean-Karim Heriche • written by KVC_bioinfo KVC_bioinfo

You are command line savvy based on your past posts. You must know that it is as simple as doing a cat chr*.fa > genome.fa. hg19 files right from source.

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written by GenoMax GenoMax

Thank you very much. I am learning and I am a new student in bioinformatics. Possibly due that reason my post my sound naive.

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written by KVC_bioinfo KVC_bioinfo

Does the link you gave is GRCh37/hg19 from NCBI?

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written by KVC_bioinfo KVC_bioinfo

1 answer

You can get it from the Ensembl FTP site. Be sure to have a look at the README file to identify what you want.

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written by Jean-Karim Heriche Jean-Karim Heriche

I wanted to get that from NCBI source.

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written by KVC_bioinfo KVC_bioinfo

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