where to download ERCC RNA spike ins fasta and gff file?

Hi everyone,

Could you please tell me where I can find the annotation and fasta file related to ERCC 92 spike ins. The Thermo fisher website only gives the fasta file. Is there any other link that I can download compatible fasta and gff files?

Thanks a lot

rna-seq

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updated 7.7 years ago by Chao Tang •

• written 8.9 years ago by Javad

2 answers

There is no GFF file for the spike-ins, if you need one then just add one line per spike-in to whatever GFF/GTF file you're using.

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written 8.9 years ago by Devon Ryan

Hi Javad, You can download this files from here: https://assets.thermofisher.com/TFS-Assets/LSG/manuals/ERCC92.zip

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written 7.7 years ago by Chao Tang •

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