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nr- protein database

hai

Hi I want to download complete Plant nr- protein database from ncbi. is there any link is available for this ?

rna-seq blast
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updated by lessismore lessismore • written by kinggang • kinggang

1 answer

It's here : ftp://ftp.ncbi.nlm.nih.gov/refseq/release/plant/

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written by lessismore lessismore

This link is for all plant refseq files (DNA and protein). Since the original request was for nr-protein data it may be better to extract the sequences from nr blast database using blastdbcmd and parsing the taxID for plants.

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written by GenoMax GenoMax

thank you for the reply ..i will try

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written by kinggang • kinggang

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