Error to install GMAP 2017
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6.7 years ago

Hi guys

Can you help me?, im trying to install GMAP, the latest version, but when Im compiling the program with the 'make' command, i get the next error :

/usr/bin/ld: //usr/local/lib/libbz2.a(bzlib.o): relocation R_X86_64_32S against `BZ2_crc32Table' can not be used when making a shared object; recompile with -fPIC
//usr/local/lib/libbz2.a: error adding symbols: Bad value
collect2: error: ld returned 1 exit status
Makefile:3502: fallo en las instrucciones para el objetivo 'libgmap.la'
make[2]: *** [libgmap.la] Error 1
make[2]: se sale del directorio '/home/irving/Descargas/gmap-2017-08-15/src'
Makefile:3417: fallo en las instrucciones para el objetivo 'all'
make[1]: *** [all] Error 2
make[1]: se sale del directorio '/home/irving/Descargas/gmap-2017-08-15/src'
Makefile:430: fallo en las instrucciones para el objetivo 'all-recursive'
make: *** [all-recursive] Error 1

What's going on? Could you help me? Thanks

gmap make • 2.0k views
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//usr/local/lib/libbz2.a(bzlib.o): relocation R_X86_64_32S against `BZ2_crc32Table' can not be used when making a shared object; recompile with -fPIC

Did you see that? What flavor of unix are you using?

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If you refers to the unix operating system, Im using Linux

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Have you tried installing using (bio)conda?

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