how to plot points distribution from a bed file and mark genes for every region ?
HI, I got a bed file , I wann view this bed region distribution at the genome (hg19） ， and I also wanna to show gene at every region at that points distribution figure ?
Best
• 1,678 views
•
link
written
by
kaixian110 •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
How to find gene annotation given a position in a bacterial genome
written by Madde •
-
Time course data analysis
written by Andrew Liu •
-
Bed file of union of all transcripts for a set of genes
written by Floydian_slip
-
How to transfer annotation from HG19 to genome sequence.
written by clear.choi •
-
how can I see the coverage of my own BED file on UCSC Genome Browser?
written by sustcyucw •
-
what's the difference between mapping PE fastqs to genome and to specified target region?
written by winter_li •
-
Calculate binned methylation data throughout hg19 with BEDOPS
written by thefirstrealace •
-
error with bedtools slop
written by Samad
-
Extracting Whole-Genome Information
written by Tom A •
-
Gene-Rich And Gene-Poor Human Genomic Location
written by Shumon Shumon •
It sounds like GenomicRanges-package could help you. It is worth looking into this tutorial