specific genes from clinvar
Hi,
How to download a list of specific genes from clinvar?
I have a file with a list of 1700 genes, and I want to download a file with all the mutations, one per each gene.
Manually, I managed to download for specific gene, output:
Name Gene(s) Condition(s) Frequency Clinical significance (Last reviewed) Review status Chromosome Location Assembly VariationID AlleleID(s)
NM_000169.2(GLA):c.1255A>G (p.Asn419Asp) GLA|RPL36A-HNRNPH2 not specified Uncertain significance(Last reviewed: Nov 5, 2015) criteria provided, single submitter X 101397844 GRCh38 246044 245168
I want to perform this automatically. I am interested only non-synonymous mutations. Can anyone guide me how to do it?
Thank you
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