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the content of FAST5 files that are generated from Poretools Events

strand mean start stdv length model_state model_level move p_model_state mp_model_state p_mp_model_state p_A p_C p_G p_T raw_index

Can anyone tell me the exact meaning of these variables returned by 'poretools events'?

Thank you!

sequencing
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updated by Biostar Biostar • written by ziqike • ziqike

Please select appropriate tags for your question. "Sequencing" is very aspecific. Reasonable tags would be "poretools" and "nanopore". Also, don't expect that everyone knows what poretools is. A bit more explanation wouldn't hurt.

I might be wrong, but I think that these metrics from poretools are derived directly from the fast5 files, and not calculated by poretools.

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written by WouterDeCoster WouterDeCoster

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