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6.8 years ago
lcsousapaula
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10
In rnaQUAST output, there is an image on topic '4 Understanding rnaQUAST output', which Transcript 1 and 2 are aligned with Genome Reference. But, Transcript 1 has one small fragment which unaligned, called 'Unaligned', on the other hand, the Transcript 2 has a bigger fragment non aligned, however, this one is called 'Unmatched'. What's the difference? Help me, please.
Manual: http://spades.bioinf.spbau.ru/rnaquast/release1.4.0/manual.html