Is there any tool to extract LD SNPs based on any other databases (except 1K database)?
Hello friends,
I am trying to extract LD SNPs for 10 rsids in CEU population. I tried using Haploreg "http://archive.broadinstitute.org/mammals/haploreg/haploreg.php" to extract LD SNPs but I couldn't get any for my list. I believe Haploreg is based on 1000 Genome database.
Is there any other tool to extract LD SNPs based on any other databases?
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